Analyzing Cognitive Evolution using Linked Data: Towards Biomedical Data Integration for Analyzing the Evolution of Cognition

Cognition is determined by the function and interplay of several hundreds, if not thousands, of genes with a considerable overlap in the disease phenotypes they can cause if mutated. We argue that, in order to understand the biological basis of cognition, these genes have to be investigated together with their evolutionary history and the diseases they are implicated in. This requires the integration of data from different research disciplines. To allow researchers to answer complicated questions related to cognition, a task that is usually very time-consuming, we propose to use Linked Data publication. Such data integration and querying methods have already been successfully used in other life science domains. In our initial effort presented here, we converted and integrated 11 different datasets and provide a first demonstration of the added value of Linked Data by showing how a set of relevant queries over the integrated data can be answered.

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News

SML-Bench 0.2 Released ( 2017-05-11T13:01:45+02:00 by Patrick Westphal)

2017-05-11T13:01:45+02:00 by Patrick Westphal

Dear all, we are happy to announce the 0.2 release of SML-Bench, our Structured Machine Learning benchmark framework. SML-Bench provides full benchmarking scenarios for inductive supervised machine learning covering different knowledge representation languages like OWL and Prolog. Read more about "SML-Bench 0.2 Released"

AKSW Colloquium, 08.05.2017, Scalable RDF Graph Pattern Matching ( 2017-05-08T09:42:49+02:00 by Lorenz Bühmann)

2017-05-08T09:42:49+02:00 by Lorenz Bühmann

At the AKSW Colloquium, on Monday 8th of May 2017, 3 PM, Lorenz Bühmann will discuss a paper titled “Type-based Semantic Optimization for Scalable RDF Graph Pattern Matching” of Kim et al. Read more about "AKSW Colloquium, 08.05.2017, Scalable RDF Graph Pattern Matching"

ESWC 2017 accepted two Demo Papers by AKSW members ( 2017-04-19T10:19:43+02:00 Christopher Schulz)

2017-04-19T10:19:43+02:00 Christopher Schulz

Hello Community! The 14th ESWC, which takes place from May 28th to June 1st 2017 in Portoroz, Slovenia, accepted two demos to be presented at the conference. Read more about them in the following:                                                                         1. Read more about "ESWC 2017 accepted two Demo Papers by AKSW members"

AKSW Colloquium, 10.04.2017, GeoSPARQL on geospatial databases ( 2017-04-07T10:43:55+02:00 by Dr. Matthias Wauer)

2017-04-07T10:43:55+02:00 by Dr. Matthias Wauer

At the AKSW Colloquium, on Monday 10th of April 2017, 3 PM, Matthias Wauer will discuss a paper titled “Ontop of Geospatial Databases“. Read more about "AKSW Colloquium, 10.04.2017, GeoSPARQL on geospatial databases"

AKSW Colloquium, 03.04.2017, RDF Rule Mining ( 2017-03-31T13:39:28+02:00 TommasoSoru)

2017-03-31T13:39:28+02:00 TommasoSoru

At the AKSW Colloquium, on Monday 3rd of April 2017, 3 PM, Tommaso Soru will present the state of his ongoing research titled “Efficient Rule Mining on RDF Data”, where he will introduce Horn Concerto, a novel scalable SPARQL-based approach … Continue reading → Read more about "AKSW Colloquium, 03.04.2017, RDF Rule Mining"